Manuscripts and Publications

A.E. Garcia-Vedrenne, Orland, C., Ballare, K.M., Shapiro, B., and Wayne, R.K. Ten strategies for a successful transition to remote learning: lessons learned with a flipped course. In Press in Ecology and Evolution

Z. Gold, Stolzenbach, K., Schweizer, T.M., Wetzer, R., Pentcheff, N.D., Wall, A.R., Curd, E.E., Meyer, R.S., and Wayne, R. 2018 Genetic barcoding and assessment of environmental DNA for biodiversity sampling within the ports of Los Angeles and Long Beach. Report for the Port of Los Angeles Environmental Management Division and Port of Long Beach Environmental Planning Division, presented June 2020

Castro, L.R., Meyer, R.S., Shapiro, B., Shirazi, S., Cutler, S., Lagos, A.M., and Quiroga, S. Metabarcoding meiofauna biodiversity assessment in four beaches of Northern Colombia: Effects of sampling protocols and primer choice. Under review in Hydrobiologia

Ruiz-Ramos, D., Meyer, R.S., Toews, D., Stephens, M., and Sexton, J. Environmental DNA (eDNA) detects ecological effects on community composition and endangered species in vernal pools. Under review in Molecular Ecology

Lafferty, K.D., Garcia‐Vedrenne, A.E., McLaughlin, J.P., Childress, J.N., Morse, M.F. and Jerde, C.L., 2020. At Palmyra Atoll, the fish‐community environmental DNA signal changes across habitats but not with tides. Journal of Fish Biology.

Lin, M., Simons, A.L., Curd, E.E., Harrigan, R.J., Schneider, F.D., Ruiz-Ramos, D.V., Gold, Z., Osborne, M.G., Shirazi, S., Schweizer, T.M. and Moore, T.N., 2020. A Biodiversity Composition Map of California Derived from Environmental DNA Metabarcoding and Earth Observation. Under review for Ecological Applications bioRxiv. https://www.biorxiv.org/content/10.1101/2020.06.19.160374v1.abstract

Gold, Z., Wall, A.R., Curd, E.E., Kelly, R.P., Pentcheff, N.D., Ripma, L., Barber, P.H. and Wetzer, R., 2020. eDNA metabarcoding bioassessment of endangered fairy shrimp (Branchinecta spp.). Conservation Genetics Resources, pp.1-6.

Curd, E.E., Gold, Z., Kandlikar, G.S., Gomer, J., Ogden, M., O'Connell, T., Pipes, L., Schweizer, T.M., Rabichow, L., Lin, M. and Shi, B., 2019. Anacapa Toolkit: an environmental DNA toolkit for processing multilocus metabarcode datasets. Methods in Ecology and Evolution, 10(9), pp.1469-1475.

Meyer, R.S., Schweizer, T.M., Kwan, W.Y., Curd, E., Wall, A., Pentcheff, D., Wetzer, R., Beraut, E., Young, A., Johnson, R. and Wayne, R.K., 2019. Beach environmental DNA fills gaps in photographic biomonitoring to track spatiotemporal community turnover across 82 phyla. In revision for Environmental DNA bioRxiv, p.680272. https://www.biorxiv.org/content/10.1101/680272v1.abstract

Meyer, R.S., Curd, E.E., Schweizer, T., Gold, Z., Ramos, D.R., Shirazi, S., Kandlikar, G., Kwan, W.Y., Lin, M., Freise, A. and Moberg-Parker, J., 2019. The California environmental DNA “CALeDNA” program. bioRxiv, p.503383. https://www.biorxiv.org/content/10.1101/503383v1.abstract

Nichols, R.V., Vollmers, C., Newsom, L.A., Wang, Y., Heintzman, P.D., Leighton, M., Green, R.E. and Shapiro, B., 2018. Minimizing polymerase biases in metabarcoding. Molecular ecology resources, 18(5), pp.927-939.